root @ pynest_update

# Date Author Comment
ad5ae075 21 Apr 2023 14:26 Padraig Gleeson (admin)

Remove versions no longer supported

84f901df 21 Apr 2023 14:25 Padraig Gleeson (admin)

Regenerated comparison figure

f56f37ee 21 Apr 2023 14:24 Padraig Gleeson (admin)

Merge branch 'master' into pynest_update

93902fe0 21 Apr 2023 14:23 Padraig Gleeson (admin)

Add script to plot spike rates used in tests on different versions

a0be1079 20 Apr 2023 22:31 Padraig Gleeson (admin)

Update to latest from nest main repo

a719ee8f 20 Apr 2023 22:19 Padraig Gleeson (admin)

Merge pull request #14 from OpenSourceBrain/test_nestsli

Updates to latest nest sli version

b06c0914 20 Apr 2023 22:18 Padraig Gleeson (admin)

Update pynn tests for N_scaling=0.1 and K_scaling=0.1

bd761071 20 Apr 2023 21:48 Padraig Gleeson (admin)

Update tests/rates for nest 3 on linux

fd0b0fdb 20 Apr 2023 21:37 Padraig Gleeson (admin)

Times changed for linux nest 3

5fb0c39d 20 Apr 2023 19:48 Padraig Gleeson (admin)

Updated to latest nest sli version from main nest repo

4c8ac91c 20 Apr 2023 00:05 Padraig Gleeson (admin)

Add spike time tests

139e8e41 19 Apr 2023 23:50 Padraig Gleeson (admin)

Test run_microcircuit.py

6d9212e4 19 Apr 2023 22:03 Padraig Gleeson (admin)

Remove change to example.py

c571c316 19 Apr 2023 22:00 Padraig Gleeson (admin)

Merge branch 'development' into pynest_update

25059f53 19 Apr 2023 21:59 Padraig Gleeson (admin)

Use: pip install 'numpy<=1.23.0' # see https://github.com/OpenSourceBrain/osb-model-validation/issues/91

b0bbd1da 19 Apr 2023 21:52 Padraig Gleeson (admin)

Merge pull request #11 from jhnnsnk/pynest_refactor

Pynest refactor

c2118f3a 19 Apr 2023 21:49 Padraig Gleeson (admin)

Test this branch

a536897c 19 Apr 2023 21:42 Padraig Gleeson (admin)

More updated times for latest pynn

9a132b91 19 Apr 2023 21:36 Padraig Gleeson (admin)

Update spike rates for latest pynn/nest

69ec0daf 19 Apr 2023 21:03 Padraig Gleeson (admin)

Just py3.9

89bcf2c5 14 Apr 2023 20:18 Padraig Gleeson (admin)

Merge branch 'master' into development

43829ac6 22 Mar 2023 23:28 Padraig Gleeson (admin)

Test py3.8 also

748a1a36 27 Jan 2023 22:33 Padraig Gleeson (admin)

Update README.md

409f3acb 13 Oct 2022 21:54 Padraig Gleeson (admin)

Not specific version pynest

849bf906 25 Aug 2022 23:14 Padraig Gleeson (admin)

Update omv-ci.yml

b866f914 18 Feb 2022 17:10 Padraig Gleeson (admin)

Update README.md

1dbdf986 17 Dec 2021 16:25 Padraig Gleeson (admin)

Update omv-ci.yml

0203ef3b 17 Dec 2021 15:19 Padraig Gleeson (admin)

Update omv-ci.yml

4faa7e30 17 Dec 2021 15:07 Padraig Gleeson (admin)

Update omv-ci.yml

45700637 17 Dec 2021 14:59 Johanna Senk

Fix reference to NEST version

6f15970c 17 Dec 2021 14:57 Padraig Gleeson (admin)

Update omv-ci.yml

e1135700 17 Dec 2021 14:54 Johanna Senk

Merge branch 'pynest_refactor' of github.com:jhnnsnk/PotjansDiesmann2014 into pynest_refactor

c794f449 17 Dec 2021 14:53 Johanna Senk

Add comment about NEST version in README

7ad2cda5 17 Dec 2021 14:49 Johanna Senk

Update microcircuit files to NEST 3.1

1eed1f04 16 Dec 2021 20:15 Padraig Gleeson (admin)

Update README.md

ac87bc1b 09 Dec 2021 15:19 Padraig Gleeson (admin)

Rename main.yml to omv-ci.yml

067bc3d7 17 Nov 2021 15:27 Padraig Gleeson (admin)

Update README.md

7c927153 17 Nov 2021 15:19 Padraig Gleeson (admin)

Update main.yml

8548f6a8 17 Nov 2021 15:17 Padraig Gleeson (admin)

Create main.yml

bffb0cc1 05 Mar 2021 16:55 Padraig Gleeson (admin)

Update tests to pass with slightly different PyNN NEST spike times on py2/py3

49715174 04 Mar 2021 00:37 Padraig Gleeson (admin)

Py3 fix

9fc87c27 04 Mar 2021 00:02 Padraig Gleeson (admin)

Test bionic

6a5c3307 25 Feb 2021 16:14 Padraig Gleeson (admin)

Update make_tests.sh

a67e57af 15 Dec 2020 14:57 Padraig Gleeson (admin)

Update README.md

d711d17e 27 Oct 2020 14:11 Johanna Senk

Fix measurement of presimulation time

27bb5028 24 Aug 2020 14:21 Johanna Senk

Add copy statement to README

e14689a9 24 Aug 2020 14:20 Johanna Senk

Update PyNEST to refactored version on nest-simulator master

0b162249 18 May 2020 14:54 Padraig Gleeson (admin)

Update .travis.yml

e04b9715 13 May 2020 16:16 Padraig Gleeson (admin)

Update README.md

89777f3d 13 Jan 2020 14:29 Padraig Gleeson (admin)

Update Comparison.md

40f6ba93 13 Jan 2020 14:28 Padraig Gleeson (admin)

Update README.md

d0ac0d54 11 Jan 2020 20:28 Sacha van Albada

changed way the figure is included in README.md

ab2f175c 11 Jan 2020 20:23 Sacha van Albada

copied description from OSB into README.md

d3053b24 14 Oct 2019 19:24 Padraig Gleeson (admin)

Adding 3D distribution of cells in column and exportability to nml

05c9eabf 14 Oct 2019 16:56 Padraig Gleeson (admin)

Remove PyNNTextIO; add test comparing PyNN to PyNEST rates

682fbd49 14 Oct 2019 16:46 Padraig Gleeson (admin)

Ensuring reproducible pynn sim

a1e28da0 14 Oct 2019 16:19 Padraig Gleeson (admin)

Extra data save options

0b23275d 11 Oct 2019 18:41 Padraig Gleeson (admin)

Initial test on PyNN

8422d66f 11 Oct 2019 18:01 Padraig Gleeson (admin)

Slightly lower tolerance for nest 2.12 on omv

b9f699d8 11 Oct 2019 16:19 Padraig Gleeson (admin)

More tests

312229b8 11 Oct 2019 15:52 Padraig Gleeson (admin)

Improved test

d86afd73 10 Oct 2019 22:06 Padraig Gleeson (admin)

Rescaled tests

1784f873 09 Oct 2019 23:44 Padraig Gleeson (admin)

Initial test on pynest

f213b129 09 Oct 2019 23:21 Padraig Gleeson (admin)

Use readme from https://github.com/nest/nest-simulator/tree/master/pynest/examples/Potjans_2014

cb0e9901 09 Oct 2019 23:05 Padraig Gleeson (admin)

Initial test on rates

22eea4f7 19 Aug 2019 18:55 Padraig Gleeson (admin)

Fixed plotting on PyNN results

6da62b0c 19 Aug 2019 17:45 Padraig Gleeson (admin)

Updated PyNEST scripts from https://github.com/nest/nest-simulator/tree/master/pynest/examples/Potjans_2014

d2b0a427 19 Aug 2019 17:22 Padraig Gleeson (admin)

Update Nest SLI comparison

ebe84f08 19 Aug 2019 15:57 Padraig Gleeson (admin)

Updateing code to latest from https://github.com/nest/nest-simulator/tree/master/examples/nest/Potjans_2014

a3e24c6a 16 Jan 2019 12:13 Padraig Gleeson (admin)

Adding licence info

Fixes #5

b93568e1 30 Jan 2018 15:40 Matt Earnshaw

add osb.yml

e74e1a2c 30 Jan 2018 15:39 Matt Earnshaw

sample update

feacf77f 30 Jan 2018 15:32 Matt Earnshaw

sample

b4168a92 15 Dec 2017 15:58 Padraig Gleeson (admin)

Initial PyNN image

635863c3 15 Dec 2017 13:34 Padraig Gleeson (admin)

PyNest plots

844cf6d0 15 Dec 2017 13:16 Padraig Gleeson (admin)

Initial comparison images

911e4230 13 Dec 2017 11:04 Padraig Gleeson (admin)

Ensure doc id = net id

c9cf408d 11 Dec 2017 14:38 Padraig Gleeson (admin)

Renaming & more h5

8e81054c 06 Dec 2017 14:48 Padraig Gleeson (admin)

Make folder for tests

fd73f6ec 05 Dec 2017 19:48 Padraig Gleeson (admin)

Update .travis.yml

00b4927d 05 Dec 2017 19:10 Padraig Gleeson (admin)

Even shorter test...

289ea80f 05 Dec 2017 18:45 Padraig Gleeson (admin)

Better install & Trusty

e27503ff 05 Dec 2017 18:35 Padraig Gleeson (admin)

Different way to handle making networks smaller

486bd80b 05 Dec 2017 18:30 Padraig Gleeson (admin)

Test update

410d9f5a 05 Dec 2017 18:11 Padraig Gleeson (admin)

Add more tests

4b0e5bff 05 Dec 2017 17:40 Padraig Gleeson (admin)

Adding version in PyNN from https://github.com/NeuralEnsemble/PyNN/tree/master/examples/Potjans2014

84fd9e2b 05 Dec 2017 11:49 Padraig Gleeson (admin)

Broken line

60b190f9 05 Dec 2017 11:36 Padraig Gleeson (admin)

Correct dir for tests

121a519a 30 Nov 2017 16:58 Padraig Gleeson (admin)

Adding hdf5 example...

8e810653 31 Aug 2017 16:14 Padraig Gleeson (admin)

Another test example

754ac45b 10 Aug 2017 10:00 Padraig Gleeson (admin)

Updated small scale network

98c5dd2b 09 Aug 2017 16:00 Padraig Gleeson (admin)

Another example

7f838bdd 04 Aug 2017 16:07 Padraig Gleeson (admin)

Adding another net for testing

6dab7ed7 24 Mar 2017 09:51 Sacha van Albada

made user_params.sli identical with version in NEST 2.12

d8d8a55e 24 Mar 2017 09:39 Sacha van Albada

added PyNEST version of the microcircuit

24b7b60e 24 Mar 2017 09:30 Sacha van Albada

Merge branch 'master' of https://github.com/OpenSourceBrain/PotjansDiesmann2014

7a158038 24 Mar 2017 09:30 Sacha van Albada

tiny corrections of README.md

8ddbef96 07 Mar 2017 19:18 Padraig Gleeson (admin)

Updated exported nml2

512655bd 24 Feb 2017 17:56 Padraig Gleeson (admin)

Big network for testing

8c900e8f 16 Aug 2016 11:32 Padraig Gleeson (admin)

Better test on original microcircuit.sli