Golgi cell reduced morphology - Eugenio Piasini
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Gjgolgi reducedmorph Gjgolgi reducedmorph Gjgolgi reducedmorph
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Name Size Revision Age Author Comment
ExcCell.nml 4.14 KB 59cfe776 almost 13 years Eugenio Piasini Added: rate-coded I/O comparison (Vervaeke, Sol...
GJGolgi_Reduced.nml 15.1 KB b9214536 over 12 years Eugenio Piasini Manipulating heterogeneity of GJ connectivity a...
GJGolgi_Reduced_TTX.nml 13.9 KB baa3f2d5 almost 13 years Eugenio Piasini Added simulation script for input resistance he...
Golgi_210710_C1.nml 516 KB b9214536 over 12 years Eugenio Piasini Manipulating heterogeneity of GJ connectivity a...
Golgi_210710_C1_TTX.nml 515 KB baa3f2d5 almost 13 years Eugenio Piasini Added simulation script for input resistance he...
Golgi_CML.nml 10.4 KB 59cfe776 almost 13 years Eugenio Piasini Added: rate-coded I/O comparison (Vervaeke, Sol...
README 1.21 KB 10895128 almost 13 years Eugenio Piasini Initial commit: nC project.

Latest revisions

# Date Author Comment
b9214536 29 Nov 2012 17:12 Eugenio Piasini

Manipulating heterogeneity of GJ connectivity as a graph-theoretical
degree distribution.
baa3f2d5 01 Nov 2012 17:06 Eugenio Piasini

Added simulation script for input resistance heterogeneity analysis.

Analysis and plotting script is still to be implemented.
a93bb2d0 30 Oct 2012 17:10 Eugenio Piasini

Added network (de)synchronisation analysis as in Vervaeke2010.

Two new simulation configurations, network_desynchronisation and
network_desynchronisation_2010gap, try to reproduce the
desynchronisation effect reported in Vervaeke2010. The expected
behaviour seems to emerge only if the gap junction connectivity is...
e706d8c6 23 Oct 2012 16:06 Eugenio Piasini

Fixed missing GJ netconn and generally improved GJs for reduced model.

Now the first segment of the apical dendrites in the reduced model is
considered as being still in the molecular layer. This is to better
reproduce the choices made for the detailed model, and it plays an...
13fe1919 22 Oct 2012 17:36 Eugenio Piasini

Rate-coded I/O analysis for parallel fibre input, with gap junctions.
f2b34742 22 Oct 2012 17:01 Eugenio Piasini

Rate-coded I/O analysis for mossy input, with gap junctions.

The gap junctions, the network and the stimuli are implemented as in
Vervaeke2012, except for heterogeneity. The detailed cell model
replicates the results in the paper, and the simplified one seems to...
7753d4ac 19 Oct 2012 14:13 Eugenio Piasini

Reduced the basolateral dendrites' size.

This results in a better match for rate-coded I/O relationship for
mossy fiber stimulation, but on the other hand the cell is now
responding too much to apical stimulation. Also, the spike shape is
less bad (the size of the little after-spike hump has decreased).
59cfe776 18 Oct 2012 17:01 Eugenio Piasini

Added: rate-coded I/O comparison (Vervaeke, Solinas and reduced).

Added various relevant scripts and nC project elements. Note that the
existing nework connections in the nC project have been renamed, and
this might have broken some of the old scripts.

At this point, the results of the rate-coded I/O relationship are:...
06738eeb 10 Oct 2012 17:09 Eugenio Piasini

Updated segment groups.
16aa0183 05 Oct 2012 16:51 Eugenio Piasini

Rotated reduced model so that it points in the correct direction.

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