Golgi cell reduced morphology - Eugenio Piasini
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Gjgolgi reducedmorph Gjgolgi reducedmorph Gjgolgi reducedmorph
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Name Size Revision Age Author Comment
coupling_strength.py 5.29 KB c4f13a19 almost 12 years Eugenio Piasini Add plot of cc distr for morph-connected cells,...
coupling_strength_plot.py 5.35 KB c4f13a19 almost 12 years Eugenio Piasini Add plot of cc distr for morph-connected cells,...
current_voltage.png 65 KB bacefb30 almost 13 years Eugenio Piasini Added current-voltage relation plotting script....
current_voltage.py 2.88 KB bacefb30 almost 13 years Eugenio Piasini Added current-voltage relation plotting script....
current_voltage_plot.py 1.68 KB bacefb30 almost 13 years Eugenio Piasini Added current-voltage relation plotting script....
current_voltage_single_cell.py 2.57 KB 9342c468 over 12 years Eugenio Piasini Added plotting script for single cell current-v...
current_voltage_single_cell_plot.png 48.4 KB 9342c468 over 12 years Eugenio Piasini Added plotting script for single cell current-v...
current_voltage_single_cell_plot.py 1.3 KB 9342c468 over 12 years Eugenio Piasini Added plotting script for single cell current-v...
dendritic_attenuation.png 40 KB 3e544529 almost 13 years Eugenio Piasini Another attenuation estimate (same cells, new r...
dendritic_attenuation.py 4.9 KB cf60a065 almost 13 years Eugenio Piasini Deleted old version of attenuation scripts and ...
dendritic_attenuation_fit.py 2.21 KB cf60a065 almost 13 years Eugenio Piasini Deleted old version of attenuation scripts and ...
desynchronisation_reduced_deg12_4.2_weight_1-5.png 83.9 KB 8270e9c0 over 12 years Eugenio Piasini Added proper variability in number of gjs per c...
desynchronisation_reduced_deg18_6.3_weight_1-3.png 81.8 KB 8270e9c0 over 12 years Eugenio Piasini Added proper variability in number of gjs per c...
desynchronisation_reduced_deg4_1.4_weight_7-11.png 104 KB 8270e9c0 over 12 years Eugenio Piasini Added proper variability in number of gjs per c...
desynchronisation_reduced_deg7_2.5_weight_3-7.png 94.7 KB 8270e9c0 over 12 years Eugenio Piasini Added proper variability in number of gjs per c...
fi.png 47.9 KB acde1c0f almost 13 years Eugenio Piasini Renamed FI curve script. Added FI results plot ...
fi.py 2.83 KB acde1c0f almost 13 years Eugenio Piasini Renamed FI curve script. Added FI results plot ...
fi_plot.py 761 Bytes 59cfe776 almost 13 years Eugenio Piasini Added: rate-coded I/O comparison (Vervaeke, Sol...
networkx 40 Bytes b9214536 over 12 years Eugenio Piasini Manipulating heterogeneity of GJ connectivity a...
rate_IO.py 3.02 KB 7753d4ac almost 13 years Eugenio Piasini Reduced the basolateral dendrites' size. This ...
rate_IO_mf_noNMDA.png 44.5 KB 7753d4ac almost 13 years Eugenio Piasini Reduced the basolateral dendrites' size. This ...
rate_IO_mf_noNMDA_withGJ_innervated.png 43.1 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_mf_noNMDA_withGJ_nonInnervated.png 39.9 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_network.py 2.72 KB baa3f2d5 almost 13 years Eugenio Piasini Added simulation script for input resistance he...
rate_IO_network_plot.py 1.95 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_pf_noNMDA.png 43.8 KB 7753d4ac almost 13 years Eugenio Piasini Reduced the basolateral dendrites' size. This ...
rate_IO_pf_noNMDA_withGJ_innervated.png 43 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_pf_noNMDA_withGJ_nonInnervated.png 43.2 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_plot.py 801 Bytes 59cfe776 almost 13 years Eugenio Piasini Added: rate-coded I/O comparison (Vervaeke, Sol...
utils.py 1.95 KB c4f13a19 almost 12 years Eugenio Piasini Add plot of cc distr for morph-connected cells,...
variable_heterogeneity.py 9.63 KB 8270e9c0 over 12 years Eugenio Piasini Added proper variability in number of gjs per c...
variable_heterogeneity_visualise.py 710 Bytes 7246bf3b over 12 years Eugenio Piasini Fixed: proper spatial distribution for gjs. Add...

Latest revisions

# Date Author Comment
c4f13a19 29 Aug 2013 15:10 Eugenio Piasini

Add plot of cc distr for morph-connected cells, and degree distr.
4f760e56 28 Aug 2013 20:18 Eugenio Piasini

Overhaul coupling strength analysis for 2010/2012 connectivity.
8270e9c0 13 Dec 2012 15:03 Eugenio Piasini

Added proper variability in number of gjs per connected pair.
7246bf3b 10 Dec 2012 16:46 Eugenio Piasini

Fixed: proper spatial distribution for gjs. Added background noise.

Now gjs are distributed on the dendritic tree according to the
experimental data reported in Vervaeke2012. Also, added background
Poisson noise as per network simulations in Vervaeke2010.
9a9897a0 10 Dec 2012 11:02 Eugenio Piasini

Fixed wrong synapse in apical stimulation.
17b5bd4b 10 Dec 2012 10:53 Eugenio Piasini

Variable leak conductance over whole cell instead of just the soma.
df03abdf 06 Dec 2012 18:28 Eugenio Piasini

Added actual heterogeneity for golgi somatic leak.

Anyway, it doensn't seem enough to desynchronise the network.
fdacd0f4 06 Dec 2012 17:05 Eugenio Piasini

Fix: attempting to create gjs between nonexistent GoCs.

Now simulations run fine.
42a540b1 05 Dec 2012 18:39 Eugenio Piasini

Implemented one nC group per golgi cell, needed for heterogen g_leak.

NEURON still crashes when trying to simulate, so it's not done yet.
451072e5 03 Dec 2012 17:33 Eugenio Piasini

Added plotting script for desynchronisation simulations. Also, enabled
GJ connection strengths to be all different from each other.

View revisions