Wiki » History » Version 4
Richard Gerkin, 30 Apr 2014 14:57
1 | 1 | Padraig Gleeson | Introduction |
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2 | 1 | Padraig Gleeson | ============ |
3 | 1 | Padraig Gleeson | |
4 | 1 | Padraig Gleeson | A project highlighting some of the possible interactions between OSB and NeuroElectro/SciUnit |
5 | 1 | Padraig Gleeson | |
6 | 1 | Padraig Gleeson | Installing SciUnit |
7 | 1 | Padraig Gleeson | ------------------ |
8 | 1 | Padraig Gleeson | |
9 | 3 | Richard Gerkin | [SciUnit]() https://github.com/rgerkin/sciunit |
10 | 1 | Padraig Gleeson | |
11 | 1 | Padraig Gleeson | The Neuroelectro API |
12 | 1 | Padraig Gleeson | -------------------- |
13 | 1 | Padraig Gleeson | |
14 | 2 | Richard Gerkin | See [here](http://goo.gl/fuPSu) |
15 | 4 | Richard Gerkin | |
16 | 4 | Richard Gerkin | Testing neuroConstruct models with neurounit (sciunit): |
17 | 4 | Richard Gerkin | ------------------------------------------------------- |
18 | 4 | Richard Gerkin | |
19 | 4 | Richard Gerkin | In jython: |
20 | 4 | Richard Gerkin | |
21 | 4 | Richard Gerkin | \$ cd \~/neuroConstruct \# Or wherever it is. |
22 | 4 | Richard Gerkin | \$ ./nCjython \# Assumes there is a “jython” somewhere in your system path. |
23 | 4 | Richard Gerkin | >>> import neurounit.jutils as j |
24 | 4 | Richard Gerkin | >>> print j.get\_volts() |
25 | 4 | Richard Gerkin | |
26 | 4 | Richard Gerkin | In python: |
27 | 4 | Richard Gerkin | |
28 | 4 | Richard Gerkin | \$ cd \~/neuroConstruct \# Or wherever it is. |
29 | 4 | Richard Gerkin | \$ python |
30 | 4 | Richard Gerkin | >>> import neurounit.putils as p |
31 | 4 | Richard Gerkin | >>> data = p.run() \# Opens the bridge to jython. |
32 | 4 | Richard Gerkin | >>> volts = data.receive() \# Runs the simulations and receives the data (hangs). |
33 | 4 | Richard Gerkin | >>> print volts |