NEURON tools for interacting with NeuroML¶

This page is in development as a central resource for all information on translating NEURON models to & from NeuroML.

Native import/export of NeuroML from/to NEURON¶

See http://www.neuroml.org/neuron/tools.php.

This info (& related scripts) will eventually be updated & moved to this repository/wiki.

Converting NMODL files into ChannelML using neuroConstruct¶

http://www.neuroconstruct.org/docs/importneuron.html#Converting+mod+file%2FGENESIS+script+channels+into+ChannelML.

A tool for creating NEURON scripts from NeuroML 2 models¶

jNeuroML can be used to convert NeuroML2/LEMS models to NEURON, see https://github.com/NeuroML/jNeuroML.

Use:

./jnml MyLEMSModel.xml -neuron

Note: try the development version (use: python getNeuroML.py development) for the most up to date export of NEURON!

A utility for generating activation variable plots from generic mod files¶

See https://github.com/OpenSourceBrain/NEURONShowcase/tree/master/HHChannelAnalyser