Edit History

Wiki » History » Version 4

Padraig Gleeson, 30 Apr 2014 14:57

1 1 Padraig Gleeson
Installation
2 2 Padraig Gleeson
------------
3 1 Padraig Gleeson
4 1 Padraig Gleeson
To get a lcoal copy of this repository [install Git](http://www.opensourcebrain.org/projects/gitintro/wiki/Wiki) and type:
5 1 Padraig Gleeson
6 1 Padraig Gleeson
git clone https://github.com/OpenSourceBrain/NineMLShowcase.git
7 1 Padraig Gleeson
8 1 Padraig Gleeson
There is a directory with examples from [NineML](http://software.incf.org/software/nineml), and one with [SpineML](http://bimpa.group.shef.ac.uk/SpineML/index.php/Home), a related language.
9 2 Padraig Gleeson
10 2 Padraig Gleeson
There is also a local copy of the NineML Schema file, against which the \*.9ml files are valid.
11 3 Padraig Gleeson
12 3 Padraig Gleeson
To regenerate these files, get a copy of the latest development NeuroML 2 code using the getNeuroML utility of [jNeuroML](https://github.com/NeuroML/jNeuroML):
13 3 Padraig Gleeson
14 3 Padraig Gleeson
git clone git://github.com/NeuroML/jNeuroML.git neuroml\_dev/jNeuroML
15 3 Padraig Gleeson
cd neuroml\_dev/jNeuroML
16 3 Padraig Gleeson
python getNeuroML.py development
17 3 Padraig Gleeson
18 3 Padraig Gleeson
and a regenerated version of these files should be in `neuroml_dev/org.neuroml.export/src/test/resources/tmp`. Edit https://github.com/NeuroML/org.neuroml.export/blob/master/src/test/java/org/neuroml/export/xineml/XineMLWriterTest.java to generate more NineML/SpineML files from LEMS. This functionality will be put in the main jNeuroML utility, `jnml` in an upcoming version.