Wiki » History » Version 3
Aditya Gilra, 30 Apr 2014 14:57
1 | 1 | Padraig Gleeson | Introduction to model |
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2 | 1 | Padraig Gleeson | ===================== |
3 | 1 | Padraig Gleeson | |
4 | 1 | Padraig Gleeson | Downloading the model |
5 | 1 | Padraig Gleeson | --------------------- |
6 | 1 | Padraig Gleeson | |
7 | 1 | Padraig Gleeson | TODO… |
8 | 1 | Padraig Gleeson | |
9 | 1 | Padraig Gleeson | Versions of the Pyloric pacemaker network model |
10 | 1 | Padraig Gleeson | ----------------------------------------------- |
11 | 1 | Padraig Gleeson | |
12 | 1 | Padraig Gleeson | ### Boris Marin’s version |
13 | 1 | Padraig Gleeson | |
14 | 1 | Padraig Gleeson | Electrophysiological data comes from this article: Gina Turrigiano, Gwendal LeMasson, and Eve Marder |
15 | 1 | Padraig Gleeson | Selective regulation of current densities underlies spontaneous changes in the activity of cultured neurons |
16 | 1 | Padraig Gleeson | [Journal of Neuroscience, 15(5 Pt 1), 3640–52, 1995](http://www.ncbi.nlm.nih.gov/pubmed/7538565) |
17 | 1 | Padraig Gleeson | |
18 | 1 | Padraig Gleeson | Model transcribed from this article: Astrid A. Prinz, Vatsala Thirumalai, and Eve Marder |
19 | 1 | Padraig Gleeson | The functional consequences of changes in the strength and duration of synaptic inputs to oscillatory neurons |
20 | 1 | Padraig Gleeson | [Journal of Neuroscience, 23(3), 943–54, 2003](http://www.ncbi.nlm.nih.gov/pubmed/12574423) |
21 | 2 | Aditya Gilra | |
22 | 3 | Aditya Gilra | This is in the neuroConstruct directory and currently runs on NEURON. |
23 | 2 | Aditya Gilra | |
24 | 2 | Aditya Gilra | ### Aditya Gilra’s version |
25 | 2 | Aditya Gilra | |
26 | 2 | Aditya Gilra | The 3 cell network is for fig 3d from : |
27 | 2 | Aditya Gilra | Similar network activity from disparate circuit parameters |
28 | 2 | Aditya Gilra | Astrid A Prinz, Dirk Bucher & Eve Marder |
29 | 2 | Aditya Gilra | Nature Neuroscience, 2004. |
30 | 2 | Aditya Gilra | |
31 | 2 | Aditya Gilra | The cell models and channel mechanisms are from: |
32 | 2 | Aditya Gilra | Alternative to Hand-Tuning Conductance-Based Models: Construction and Analysis of Databases of Model Neurons |
33 | 2 | Aditya Gilra | Astrid A. Prinz, Cyrus P. Billimoria, and Eve Marder, |
34 | 2 | Aditya Gilra | J Neurophysiol 90: 3998–4015, 2003. |
35 | 2 | Aditya Gilra | |
36 | 2 | Aditya Gilra | The same cell is used as the basis for 3 cells AB\_PD, LP and PY with different channel densities, |
37 | 2 | Aditya Gilra | connected in the pyloric rhythm generator network specified in Fig 3d of Prinz, Bucher and Marder, 2004 above. |
38 | 2 | Aditya Gilra | Differences from the original model: synapses are thresholded rather than graded. |
39 | 2 | Aditya Gilra | |
40 | 3 | Aditya Gilra | This is in the neuroConstruct\_alt directory and currently runs on MOOSE buildQ branch. |