Wiki » History » Version 10
Padraig Gleeson, 30 Apr 2014 14:57
| 1 | 1 | Padraig Gleeson | Wiki |
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| 2 | 1 | Padraig Gleeson | ==== |
| 3 | 1 | Padraig Gleeson | |
| 4 | 2 | Padraig Gleeson | Introduction |
| 5 | 2 | Padraig Gleeson | ------------ |
| 6 | 2 | Padraig Gleeson | |
| 7 | 5 | Padraig Gleeson | This model of a [striatal spiny projection neuron](http://neurolex.org/wiki/Category:Neostriatum_medium_spiny_neuron#tab=Basic) is in development in GENESIS, but a version is under construction here in NeuroML 2 format. |
| 8 | 2 | Padraig Gleeson | |
| 9 | 1 | Padraig Gleeson | Clone the project |
| 10 | 1 | Padraig Gleeson | ----------------- |
| 11 | 2 | Padraig Gleeson | |
| 12 | 7 | Padraig Gleeson | To get a local copy of this project clone with [Mercurial](http://www.opensourcebrain.org/hg/): |
| 13 | 2 | Padraig Gleeson | |
| 14 | 6 | Padraig Gleeson | `hg clone http://www.opensourcebrain.org/hg/osb/models/basal_ganglia/medium_striatal_neuron/StriatalSpinyProjectionNeuron` |
| 15 | 2 | Padraig Gleeson | `cd StriatalSpinyProjectionNeuron` |
| 16 | 2 | Padraig Gleeson | |
| 17 | 2 | Padraig Gleeson | Test the project |
| 18 | 2 | Padraig Gleeson | ---------------- |
| 19 | 2 | Padraig Gleeson | |
| 20 | 3 | Padraig Gleeson | Install NeuroML 2/libNeuroML, see [here](http://www.neuroml.org/neuroml2.php#libNeuroML). Remember to set the **NML2\_HOME** environment variable. |
| 21 | 2 | Padraig Gleeson | |
| 22 | 4 | Padraig Gleeson | Run the example cell with: |
| 23 | 4 | Padraig Gleeson | |
| 24 | 4 | Padraig Gleeson | `nml2 Test_lems.xml` |
| 25 | 8 | Padraig Gleeson | |
| 26 | 10 | Padraig Gleeson | Also try the other example. Note more work is needed to get this behaving like a real SSN, but the channels can be tested with this example: |
| 27 | 8 | Padraig Gleeson | |
| 28 | 8 | Padraig Gleeson | `nml2 LemsSim.xml` |
| 29 | 8 | Padraig Gleeson | |
| 30 | 8 | Padraig Gleeson | See plots of this example below: |
| 31 | 8 | Padraig Gleeson | |
| 32 | 9 | Padraig Gleeson |  |