Edit History

Wiki » History » Version 4

Vitor Chaud, 30 Apr 2014 14:57

1 1 Vitor Chaud
Model overview
2 2 Vitor Chaud
==============
3 1 Vitor Chaud
4 4 Vitor Chaud
[Vogels et al 2011](http://www.sciencemag.org/content/334/6062/1569.short) provides an extension of the model described in [Vogels and Abbott 2005](http://www.jneurosci.org/content/25/46/10786.short) mainly in order to evaluate the role of inhibitory synapse plasticity in recovering an asynchronous network state after a manifestation of some memory pattern (i.e., highly correlated activity of some neuron group).
5 4 Vitor Chaud
6 1 Vitor Chaud
Downloading and running a simulation
7 1 Vitor Chaud
====================================
8 1 Vitor Chaud
9 4 Vitor Chaud
Install [PyNN](http://neuralensemble.org/trac/PyNN/wiki/Installation). Make sure to use the latest v0.8 version from [GitHub](https://github.com/NeuralEnsemble/PyNN), which includes the required Vogels2011Rule synapse. Note: NEURON is the only supported simulator for this model at the moment. As they showed …
10 1 Vitor Chaud
11 1 Vitor Chaud
[Install Git](http://www.opensourcebrain.org/projects/gitintro/wiki/Wiki) and type:
12 1 Vitor Chaud
13 1 Vitor Chaud
    > git clone https://github.com/OpenSourceBrain/VogelsEtAl2011.git
14 1 Vitor Chaud
15 1 Vitor Chaud
    > cd VogelsEtAl2011/PyNN
16 1 Vitor Chaud
17 1 Vitor Chaud
To run a simulation type:
18 1 Vitor Chaud
19 1 Vitor Chaud
    > python vogelsEtAl2011.py neuron