Revision:

Revisions

# Date Author Comment
162d58a8 13 Aug 2018 11:05 Jessica Dafflon

Python: Plot Periodogram of the signal

  • The script just takes the periodogram of the generated data and plot it
1175f55b 10 Aug 2018 15:52 Jessica Dafflon

Python: Add better description and save intralaminar image
a885289d 10 Aug 2018 15:47 Jessica Dafflon

Update README.md
bd4fe3af 10 Aug 2018 12:37 Jessica Dafflon

Update requirements.txt and add overview images
1618e894 10 Aug 2018 11:52 Jessica Dafflon

NeuroML: Generate neuromllite interlaminar network overview
03de3718 07 Aug 2018 22:33 Padraig Gleeson (admin)

More ideas
70a8f43c 07 Aug 2018 22:25 Padraig Gleeson (admin)

More ideas for nml
feedbd9a 07 Aug 2018 22:22 Padraig Gleeson (admin)

Initial implemetation of noisy cells
ad0bea82 07 Aug 2018 22:22 Padraig Gleeson (admin)

Update to use rate cell
32abd28a 07 Aug 2018 22:22 Padraig Gleeson (admin)

Initial net gen
13823a2c 07 Aug 2018 22:20 Padraig Gleeson (admin)

Update to NML version
9f9d715c 07 Aug 2018 13:51 Jessica Dafflon

Python: Interareal

  • Initial interareal definitions
cb8379c9 04 Aug 2018 18:37 Jessica Dafflon

Python: Interlaminar

  • Add test code where I try to obtain a similar analysis results as described on
  • the paper
93fe9a93 04 Aug 2018 18:16 Jessica Dafflon

Python: Correct arguemnts passed to interlaminar_simulation
e9b4666b 04 Aug 2018 17:33 Jessica Dafflon

Python: Move requirements one folder up
8481e952 03 Aug 2018 12:17 Jessica Dafflon

Python: Interlaminar simulation

  • Remove the code taht loads the mat file
  • Do not run the analysis the spectrogram - Figure 3.B (top)
61b59b81 03 Aug 2018 12:13 Jessica Dafflon

Python: Update bash script

  • Call interlaminar simulation and plot the results for layer 5/6 (Fig 3.B)
914e3a02 03 Aug 2018 12:04 Jessica Dafflon

Python: calculate rate

  • Pass number of regions under analysis
  • Change the dimensions of xi and rate
c2de109f 03 Aug 2018 10:00 Jessica Dafflon

Python: Add requirement files

  • Add requirement file with necessary python packages and versions
46b72464 03 Aug 2018 09:40 Jessica Dafflon

Python: Interlaminar
* Use simulated data to plot L5/6 traces of activity
a4c74cb1 03 Aug 2018 08:50 Jessica Dafflon

Python: Correct for array lenght on calculate_length
6403e2d5 02 Aug 2018 09:46 Jessica Dafflon

Python: Interlaminar

  • Fix indices for calculation of the traces of activity in layer 5/6
1cfbdebf 02 Aug 2018 09:43 Jessica Dafflon

Python: Interlaminar

  • Add first draft to calculate the periodogram of L2/5
  • Mejias-2016 now calls the 2 functions for the interlaminar analysis
f094255b 01 Aug 2018 23:41 Jessica Dafflon

Python: Interlaminar plot traces of activity on L5/6 layer

  • Plot figure 3b
  • It is still work in progress
098688ec 01 Aug 2018 23:41 Jessica Dafflon

Python: Correct minor typo
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