Revision:

Revisions

# Date Author Comment
7ae22bf1 27 Sep 2018 21:44 Padraig Gleeson (admin)

Update .travis.yml
c64436e0 27 Sep 2018 18:37 Padraig Gleeson (admin)

Update .travis.yml
8209ab1c 27 Sep 2018 18:34 Padraig Gleeson (admin)

Add python test
56c38494 27 Sep 2018 18:25 Padraig Gleeson (admin)

Add initial travis script
b709f05b 27 Sep 2018 18:19 Padraig Gleeson (admin)

Merge pull request #4 from OpenSourceBrain/dev_python

Improve speed of the python simulation
1b9b6657 26 Sep 2018 18:05 Jessica Dafflon

Python: Layout and modularisation improvements

  • interlaminar.py: Generate a single figure when runing interlaminar analysis
  • Mejias-2016:Pack parameters inside a function to be called by other scripts
  • and improve printing layout
  • calculate_rate: Remove unused numba functions
fe000f93 24 Sep 2018 10:43 Jessica Dafflon

Update requirements
23b61efd 23 Sep 2018 23:29 Jessica Dafflon

Python: Use numba

  • Use numba to vectorise the calculate_rate function
34438f10 21 Sep 2018 17:07 Jessica Dafflon

Python: Improve print layouts and fix shape of Inputs
da48397a 21 Sep 2018 14:59 Jessica Dafflon

Mejias: Use np multiplication and additions on the main loop
dd3def9f 21 Sep 2018 12:14 Jessica Dafflon

Mejias: use map and lambda functions on main loop
5368332e 20 Sep 2018 16:17 Jessica Dafflon

Mejias: Use zip to do main loop multiplication
a78ae601 14 Sep 2018 13:17 Padraig Gleeson (admin)

Start longer run at 1Hz
9c5d2f85 14 Sep 2018 13:08 Padraig Gleeson (admin)

Updated generate script which reloads debugging output from python version
a3961c5f 14 Sep 2018 11:05 Padraig Gleeson (admin)

Progress testing NML versions
2573c216 12 Sep 2018 12:02 Jessica Dafflon

Python: Firing rate over time for intra- inter simulations

Plot and save .txt files for the intra- and interlevel simulations
80247a7f 14 Aug 2018 14:36 Jessica Dafflon

Merge pull request #1 from OpenSourceBrain/dev_python

Dev python
4a0d147d 14 Aug 2018 10:06 Jessica Dafflon

Python: Interlaminar and Interlaminar

  • Make code more modular and easier to follow
4cc07d38 13 Aug 2018 19:01 Jessica Dafflon

Add interlaminar plot
f437f24f 13 Aug 2018 18:52 Jessica Dafflon

Python: Add script that generates the golden data for testing the calculate_rate
function
85752f14 13 Aug 2018 18:50 Jessica Dafflon

Improve README.md
761af61d 13 Aug 2018 17:19 Jessica Dafflon

Interlaminar: Plot traces of activity and save it
dc7687fa 13 Aug 2018 16:41 Jessica Dafflon

Python: calculate power spectrum of the two populations (interlaminar)
83b74c21 13 Aug 2018 12:27 Jessica Dafflon

Add simple python tests

  • test the main results from the calculate_rate function
ea02cee9 13 Aug 2018 12:26 Jessica Dafflon

Python: Fix the way the random seed is defined
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