Golgi cell reduced morphology - Eugenio Piasini
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Gjgolgi reducedmorph Gjgolgi reducedmorph Gjgolgi reducedmorph
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root / neuroConstruct / scripts @ match_absolute_response

Name Size Revision Age Author Comment
coupling_strength.py 3.06 KB 99d61954 over 12 years Eugenio Piasini Coupling strength simulation and plotting scripts.
coupling_strength_plot.py 1.8 KB 99d61954 over 12 years Eugenio Piasini Coupling strength simulation and plotting scripts.
current_voltage.png 65 KB bacefb30 almost 13 years Eugenio Piasini Added current-voltage relation plotting script....
current_voltage.py 2.88 KB bacefb30 almost 13 years Eugenio Piasini Added current-voltage relation plotting script....
current_voltage_plot.py 1.68 KB bacefb30 almost 13 years Eugenio Piasini Added current-voltage relation plotting script....
current_voltage_single_cell.py 2.57 KB 9342c468 over 12 years Eugenio Piasini Added plotting script for single cell current-v...
current_voltage_single_cell_plot.png 48.4 KB 9342c468 over 12 years Eugenio Piasini Added plotting script for single cell current-v...
current_voltage_single_cell_plot.py 1.3 KB 9342c468 over 12 years Eugenio Piasini Added plotting script for single cell current-v...
dendritic_attenuation.png 40 KB 3e544529 almost 13 years Eugenio Piasini Another attenuation estimate (same cells, new r...
dendritic_attenuation.py 4.9 KB cf60a065 almost 13 years Eugenio Piasini Deleted old version of attenuation scripts and ...
dendritic_attenuation_fit.py 2.21 KB cf60a065 almost 13 years Eugenio Piasini Deleted old version of attenuation scripts and ...
fi.png 47.9 KB acde1c0f almost 13 years Eugenio Piasini Renamed FI curve script. Added FI results plot ...
fi.py 2.83 KB acde1c0f almost 13 years Eugenio Piasini Renamed FI curve script. Added FI results plot ...
fi_plot.py 761 Bytes 59cfe776 almost 13 years Eugenio Piasini Added: rate-coded I/O comparison (Vervaeke, Sol...
networkx 40 Bytes b9214536 over 12 years Eugenio Piasini Manipulating heterogeneity of GJ connectivity a...
rate_IO.py 3.02 KB 7753d4ac almost 13 years Eugenio Piasini Reduced the basolateral dendrites' size. This ...
rate_IO_mf_noNMDA.png 44.5 KB 7753d4ac almost 13 years Eugenio Piasini Reduced the basolateral dendrites' size. This ...
rate_IO_mf_noNMDA_withGJ_innervated.png 43.1 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_mf_noNMDA_withGJ_nonInnervated.png 39.9 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_network.py 2.72 KB baa3f2d5 almost 13 years Eugenio Piasini Added simulation script for input resistance he...
rate_IO_network_plot.py 1.95 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_pf_noNMDA.png 43.8 KB 7753d4ac almost 13 years Eugenio Piasini Reduced the basolateral dendrites' size. This ...
rate_IO_pf_noNMDA_withGJ_innervated.png 43 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_pf_noNMDA_withGJ_nonInnervated.png 43.2 KB e706d8c6 almost 13 years Eugenio Piasini Fixed missing GJ netconn and generally improved...
rate_IO_plot.py 801 Bytes 59cfe776 almost 13 years Eugenio Piasini Added: rate-coded I/O comparison (Vervaeke, Sol...
utils.py 1.61 KB b9214536 over 12 years Eugenio Piasini Manipulating heterogeneity of GJ connectivity a...
variable_heterogeneity.py 3.53 KB 451072e5 over 12 years Eugenio Piasini Added plotting script for desynchronisation sim...
variable_heterogeneity_visualise.py 761 Bytes 451072e5 over 12 years Eugenio Piasini Added plotting script for desynchronisation sim...

Latest revisions

# Date Author Comment
451072e5 03 Dec 2012 17:33 Eugenio Piasini

Added plotting script for desynchronisation simulations. Also, enabled
GJ connection strengths to be all different from each other.
b9214536 29 Nov 2012 17:12 Eugenio Piasini

Manipulating heterogeneity of GJ connectivity as a graph-theoretical
degree distribution.
9342c468 14 Nov 2012 17:20 Eugenio Piasini

Added plotting script for single cell current-voltage relationship.
99d61954 02 Nov 2012 18:06 Eugenio Piasini

Coupling strength simulation and plotting scripts.
bacefb30 02 Nov 2012 11:55 Eugenio Piasini

Added current-voltage relation plotting script.

The current-voltage relation (and, consequently, the input resistance)
doesn't seem to exhibit any significant heterogeneity induced by the
gap junction distribution.
baa3f2d5 01 Nov 2012 17:06 Eugenio Piasini

Added simulation script for input resistance heterogeneity analysis.

Analysis and plotting script is still to be implemented.
e706d8c6 23 Oct 2012 16:06 Eugenio Piasini

Fixed missing GJ netconn and generally improved GJs for reduced model.

Now the first segment of the apical dendrites in the reduced model is
considered as being still in the molecular layer. This is to better
reproduce the choices made for the detailed model, and it plays an...
13fe1919 22 Oct 2012 17:36 Eugenio Piasini

Rate-coded I/O analysis for parallel fibre input, with gap junctions.
f2b34742 22 Oct 2012 17:01 Eugenio Piasini

Rate-coded I/O analysis for mossy input, with gap junctions.

The gap junctions, the network and the stimuli are implemented as in
Vervaeke2012, except for heterogeneity. The detailed cell model
replicates the results in the paper, and the simplified one seems to...
acde1c0f 19 Oct 2012 17:05 Eugenio Piasini

Renamed FI curve script. Added FI results plot to the repo.

View revisions