Simulating attenuation for original Golgi model (Na channels switched off as per TTX)
Added a new simulation configuration where GJGolgi_Reduced is simply left alone.
Actual reference morphologies.
Committing reference morphologies, now that neuroConstruct has been fixed to not shuffle channels and synaptic types in NeuroML serialisations and to keep track of the number of internal divisions in each segment. See r1686 and r1689 in nC's svn repo.
test (modified allowed location for a synaptic type)
test (modified only one morphology)
test (added ordering of synaptic types)
test
Testing alphabetical reordering of channels for serialisation.
Now the location of the synaptic input can be changed, and can be iterated over. Also added a simple plotting script.
Trying to script an attenuation-length analysis that could be compared to Koen's 2012 paper.
The script itself is not yet usable. I have imported a cell from Vervaeke2012 (mainly for the synaptic model, but also to keep it there as a comparison) and a spike relay that I need to simulate a single...
Initial commit: nC project.
Initial commit: ignore file.