Golgi cell reduced morphology - Eugenio Piasini
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Gjgolgi reducedmorph Gjgolgi reducedmorph Gjgolgi reducedmorph
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Name Size Revision Age Author Comment
attenuation.py 4.99 KB 93ddc84c almost 13 years Eugenio Piasini Included the 240710_C0 model, as an alternative...
attenuation_fit.py 3.17 KB 93ddc84c almost 13 years Eugenio Piasini Included the 240710_C0 model, as an alternative...
fi_comparison.py 1.95 KB f920ef97 almost 13 years Eugenio Piasini Added scripts for simulating and plotting an F-...
fi_plot.py 698 Bytes 93ddc84c almost 13 years Eugenio Piasini Included the 240710_C0 model, as an alternative...

Latest revisions

# Date Author Comment
93ddc84c 20 Sep 2012 11:29 Eugenio Piasini

Included the 240710_C0 model, as an alternative to 210710_C1.

Imported the model and modified the relevant simulation/analysis
scripts. Note that setting sodium and potassium reversal potential over
the whole cell crashes neuroConstruct for some reason.
32ded58d 18 Sep 2012 17:41 Eugenio Piasini

Revert "Begun importing other version of detailed morphology GoC."

This reverts commit be055a8cbbf8955c1fc67608f7be31bddc890804.
be055a8c 18 Sep 2012 17:10 Eugenio Piasini

Begun importing other version of detailed morphology GoC.
3d50f15c 18 Sep 2012 15:41 Eugenio Piasini

Varying the number of stimulation points on the detailed dendrites.

Still fairly hard-coded, but at least I now have more than 3 points for
the exponential fit on the detailed morphology.
a1363158 14 Sep 2012 17:21 Eugenio Piasini

Removed recording of superfluous data during simulations.
c2c23cff 14 Sep 2012 16:50 Eugenio Piasini

Scripts seem to be working fine.

Attenuation seems to match between the two models
(at least with the 4-5-6 dendrite on the reduced
morphology and a specific choice of compartments
on the detailed one), but they both seem to give
different results than those in the paper.
23e72a77 14 Sep 2012 14:50 Eugenio Piasini

Tidied up the code.
ed62ce34 13 Sep 2012 16:14 Eugenio Piasini

Working on the simulation/analysis scripts.

Added plotting of dependance of maximum somatic response amplitude
on distance of stimulation along the dendritic tree.
18f23cd8 12 Sep 2012 17:46 Eugenio Piasini

Playing around with morphology to see effects on FI and attenuation.
575383cc 12 Sep 2012 16:13 Eugenio Piasini

Adjusted spike detection threshold to avoid picking up doublets
in the Vervaeke cell when calculating the F-I curve.

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