Blender to NeuroML for C elegans connectome
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Curation against published models
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root / src / Data @ master

Name Size Revision Age Author Comment
302.ods 28.3 KB 98521971 over 11 years Stephen Larson Initial commit
302.xlsx 23.9 KB b38d4a1b about 3 years TC update
NeuronConnect.xls 506 KB 98521971 over 11 years Stephen Larson Initial commit
NeuronType.xls 59.5 KB 98521971 over 11 years Stephen Larson Initial commit
Virtual_Worm_February_2012.blend 10.4 MB b38d4a1b about 3 years TC update
Virtual_Worm_March_2011.blend 17 MB 036c7ab7 about 3 years TC Update Virtual_Worm_March_2011.blend added tra...
Virtual_Worm_March_2011.wrl 8.22 MB 98521971 over 11 years Stephen Larson Initial commit
Virtual_Worm_Neuron_Only_February_2012.blend 13.6 MB 3495dcab about 3 years TC created neuron only versions just cause my scr...
Virtual_Worm_Neuron_Only_March_2011.blend 17.2 MB ac64f74a about 3 years TC Update Virtual_Worm_Neuron_Only_March_2011.blen...
Virtual_Worm_Neuron_Only_March_2011_with_skin.blend 17.2 MB ef6030bd about 3 years TC Update Virtual_Worm_Neuron_Only_March_2011_with...
blenderFileObjs.txt 6.79 KB 2a67cacb about 3 years TC populated text files
neurons.complete.txt 1.42 KB 6c40e822 about 3 years TC Update neurons.complete.txt oops
neurons.complete_OLD.txt 1.73 KB fa06d86e about 3 years TC Fixed neuron finder script
neurons.txt 4 Bytes 75cdbfdb over 3 years TC Testing Extra File
neurons.txt.test1m 19 Bytes 516e06cd over 11 years Peter C. McCluskey include muscles, see notes.txt for details
spine-spline.tsv 0 Bytes 6fa5edf9 about 3 years TC Debugging Imports and Path Vars inblenderToNeur...
stevecooksdata.csv 513 KB 516e06cd over 11 years Peter C. McCluskey include muscles, see notes.txt for details

Latest revisions

# Date Author Comment
ef6030bd 17 May 2022 22:39 TC

Update Virtual_Worm_Neuron_Only_March_2011_with_skin.blend
ac64f74a 13 May 2022 21:29 TC

Update Virtual_Worm_Neuron_Only_March_2011.blend

edited shortcuts
e52c1f27 13 May 2022 21:29 TC

Create Virtual_Worm_Neuron_Only_March_2011_with_skin.blend

for skin reference
036c7ab7 12 May 2022 06:04 TC

Update Virtual_Worm_March_2011.blend

added transparency and turned off loose search in object browser
3495dcab 12 May 2022 06:00 TC

created neuron only versions

just cause my script was kind of doing it anyways
6c40e822 12 May 2022 05:58 TC

Update neurons.complete.txt

oops
5f2d8f0a 11 May 2022 21:25 TC

Update Virtual_Worm_March_2011.blend

removed .blend file autosaves (over populated the data file and causes crashing when using python scripts in blender)
Changed cuticle's viewport material color's alpha channel to .25 to make it transparent to be able to visualize neurons in relation to it.
b97ff6c2 11 May 2022 21:17 TC

restored og_vworm

just so my imaging script will be tailored to the og file
2a67cacb 11 May 2022 21:06 TC

populated text files
35826ad6 11 May 2022 20:59 TC

clean up

deleting all the scripts that don't really matter to me anymore that I wrote.
They were just for collecting objdata from the .blend files and the 302.xls sheet. But they were supposed to interact with the Blender API and when I removed that they just stopped working- and I got sick of them because I already got the data I needed and so I'm just getting rid of them. If I want, I can rewrite them with the express purpose of extracting data-- but there are other more important things.

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