Wiki » History » Version 9
Version 8 (Padraig Gleeson, 30 Apr 2014 14:57) → Version 9/45 (Padraig Gleeson, 30 Apr 2014 14:57)
Introduction
------------
This project will contain examples of the Izhikevich spiking neuron model.
### Installation
To get local clone of this project…
### Versions of the project
The original model in [MATLAB format](http://izhikevich.org/publications/figure1.m) has been converted to a number of other formats.
#### PyNN
…
Tested with simulators: NEURON…
#### NeuroML 2
…
The XML for an Izhikevich model in NeuroML v2.0 is below:
<code class="xml">
<izhikevichCell id="TonicSpiking" v0 = "-70mV" thresh = "30mV" a ="0.02" b = "0.2" c = "-65.0" d = "6" Iamp="0" Idel="0ms" Idur="2000ms"/></code>
For full examples of single cells see [TonicSpiking](/projects/izhikevichmodel/repository/entry/neuroConstruct/cellMechanisms/TonicSpiking/TonicSpiking.nml) or [PhasicBursting](/projects/izhikevichmodel/repository/entry/neuroConstruct/cellMechanisms/PhasicBursting/PhasicBursting.nml)
Tested with simulators: …
### Comparison to original model behaviour
table{border:1px solid black}.
{background:\#ddd}. | |**PyNN** |**NeuroML** |
|A |OK |OK |
|B |OK |OK |
|C |OK |OK |
|D |OK |OK |
|E |OK |OK |
|F |OK |OK |
|G |not yet implemented| problem: different model parameterization|
|H |not yet implemented| OK |
|I |OK| OK|
|J |OK| OK|
|K |not yet implemented| OK |
|L |not yet implemented| problem different model parameterization|
|M |OK| OK |
|N |OK| OK |
|O |not not yet implemented| OK |
|P |PROBLEM| problem |
|Q |PROBLEM| problem response depending on the time step|
|R |not yet implemented| PROBLEM different from fig1|
|S |PROBLEM| PROBLEM response depending on the time step|
|T |PROBLEM (diverg.)| PROBLEM response depending on the time step|
------------
This project will contain examples of the Izhikevich spiking neuron model.
### Installation
To get local clone of this project…
### Versions of the project
The original model in [MATLAB format](http://izhikevich.org/publications/figure1.m) has been converted to a number of other formats.
#### PyNN
…
Tested with simulators: NEURON…
#### NeuroML 2
…
The XML for an Izhikevich model in NeuroML v2.0 is below:
<code class="xml">
<izhikevichCell id="TonicSpiking" v0 = "-70mV" thresh = "30mV" a ="0.02" b = "0.2" c = "-65.0" d = "6" Iamp="0" Idel="0ms" Idur="2000ms"/></code>
For full examples of single cells see [TonicSpiking](/projects/izhikevichmodel/repository/entry/neuroConstruct/cellMechanisms/TonicSpiking/TonicSpiking.nml) or [PhasicBursting](/projects/izhikevichmodel/repository/entry/neuroConstruct/cellMechanisms/PhasicBursting/PhasicBursting.nml)
Tested with simulators: …
### Comparison to original model behaviour
table{border:1px solid black}.
{background:\#ddd}. | |**PyNN** |**NeuroML** |
|A |OK |OK |
|B |OK |OK |
|C |OK |OK |
|D |OK |OK |
|E |OK |OK |
|F |OK |OK |
|G |not yet implemented| problem: different model parameterization|
|H |not yet implemented| OK |
|I |OK| OK|
|J |OK| OK|
|K |not yet implemented| OK |
|L |not yet implemented| problem different model parameterization|
|M |OK| OK |
|N |OK| OK |
|O |not not yet implemented| OK |
|P |PROBLEM| problem |
|Q |PROBLEM| problem response depending on the time step|
|R |not yet implemented| PROBLEM different from fig1|
|S |PROBLEM| PROBLEM response depending on the time step|
|T |PROBLEM (diverg.)| PROBLEM response depending on the time step|