NEURON Showcase

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Padraig Gleeson, 02 May 2014 11:24


Information

This page is in development as a central resource for all information on translating NEURON models to & from NeuroML.

Native import/export of NeuroML from/to NEURON

See http://www.neuroml.org/neuron/tools.php. This info (& related scripts) will be updated & moved to this repository/wiki.

Converting NMODL files into ChannelML using neuroConstruct

http://www.neuroconstruct.org/docs/importneuron.html#Converting+mod+file%2FGENESIS+script+channels+into+ChannelML

A tool for creating NEURON scripts from NeuroML 2 models

https://github.com/NeuroML/jNeuroML

Use:

./jnml MyLEMSModel.xml -neuron

Note: try the development version (use: python getNeuroML.py development) for the most up to date export of NEURON.

A utility for generating activation variable plots from generic mod files

https://github.com/OpenSourceBrain/NEURONShowcase/tree/master/HHChannelAnalyser